Trinity 2.6.6 #1937
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Trinity 2.6.6 #1937
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bgruening
reviewed
Jun 13, 2018
| <option value="no">No</option> | ||
| </param> | ||
| <when value="yes"> | ||
| <param format="tabular" name="gene_trans_map" argument="--gene_trans_map" type="data" label="Gene to transcript correspondence ('gene(tab)transcript' lines)" /> |
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could you not just use the param and make it optional and remove the conditional?
tools/trinity/super_transcripts.xml
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| </macros> | ||
| <expand macro="requirements"/> | ||
| <command detect_errors="aggressive"><
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Thanks @abretaud! |
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Hi, Lucille |
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@lldelisle there's a conda package for this version of trinity (https://anaconda.org/bioconda/trinity) |
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Here's an update from Trinity 2.4.0 to 2.6.6
Now there's a wrapper to generate super transcripts.
As things would have been too simple with just changing the
@WRAPPER_VERSION@, I also add to update a few dependencies, countless test data, and update some wrappers a now trinity generates a gene map that needs to be reused by some of the scripts (replacing--trinity_mode)